Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928622.1_cds_XP_016476167.1_68025
CDS Infomation

[gene=LOC107797757] [db_xref=GeneID:107797757] [protein=transcription factor bHLH49-like] [protein_id=XP_016476167.1] [location=join(34440..35306,35440..35664,35744..35809,35887..35955,36268..36339,36439..36645,36871..36955,37045..37082)] [gbkey=CDS]
Sequence

ATGGATATGAGTAGCAAGAATGATACTGAGCAACTAAAGGTGAACGAGGATGCTGGGAAT
TTTCAGTTACCAAATATGTCATTAGAGTGGCAATTAAGTGACACCAACTTGACAAATGCA
TCCATTGGAATGATCCCTAAAAGTGATCCTACAGTAGATTCATTTTATCCCACTATTTGG
GATCGACCTACTAATTCCCCAAACTTAAGTTTCTACGGTAATAATGTTCAAATTAATCCT
AGCACTACAAATCCACACGGAATTGCAGAAATTGGCTCAGGCCGTGCAAGAGGTGGTGTT
GATAGAACAGTTGGTATGAGTTGGAATCCACCGAATGCAATGCTGAAAGGGGGCGTGTTT
GTACCGCCTAATATTGGAATGCTTCCTCAAAGCTTAGCTCAGCTTCCAGCTGATTCAGGC
TTCATTGAGAGAGCTGCAAGGTTTTCGTGCTTCAGTGGAGGAAACTTCAGTGATATGATG
AACCCTTTTAGCATCCCTGAGTCTGTGAAGCCTTGTTATAGGGGACTTGCGCCAACGTGC
AGGTCAGAAGATGTTTTTGCAAGCAACGGATTAAACTCACCCTCTGCTATAAACCCTCAG
AAGCAGCATATGAGAAATGCGGTTGAAAGTTCCAAGGATGTTGCTTTACATAGAGAGCAT
GAGACCAATAAAGAAAGCCCTCTCAAGAATGAGAAAAAGAATGAAAACTTTGGTAAGTCT
CAGGGTGAAGGAAAAGAAGCAGTTGGATTGTCCGGAAATGAGTCTGATGAAGCTGAATGT
AGTGGCCGTCAAGAGGAAATGGAAGGCGCTAGGGAGGAGTCTTCCTCAAAGGGCCTTGGC
TCAAAGAAAAGGAAAAGAAATGATCAGGATGCTCAACCTGATCAAATGAAGGGAGCGCAA
CAACCGCCAGCTGAACATGCACAAGATCAAACTGAAATTCAGGGGGGACCAAACTTGAAT
TCAACTGCCAGCAAACCCGGTGAAAAAAACAGTAAAGAGAGGTCTCAAGCTTCAGATCCA
CCTAAAGAAGAATACATACACATTCGAGCTCGACGAGGCCAGGCAACGAATAGCCATAGT
CTTGCAGAAAGAGTAAGGCGAGAGAAAATCAGTGAACGAATGAAGTATCTTCAGGATCTT
GTACCTGGTTGCAACAAGGTCACTGGTAAAGCTGTAATGTTGGATGAAATCATTAATTAT
GTACAATCTCTGCAAAGACAGGTTGAGTTCCTCTCGATGAAGCTTGCAACAGTAAACCCA
CAGCTAGATTTTAATCTTGATGGGCTCCTTGCAAAAGATATCCTCCAGTCGCAAGCAGGG
CCTTCATCCTCACTTGTTTTTCCACCTGATAATATGACCATGCCTTATACTTCTTTGCAT
GCATTGCAATCCGGTCTGCTTCAGTCAGGTTTTCCTGGTGTGGGAAATTGTACTGATTCA
TTTCGTAGATCCATCAATTCCCATTACGCCTCTATGAGTGGTGGCTATAAGGATACTTCA
TCTCAGGTACCTAATATTTGGGATGACCAGCTACATAATGTTGTAGAGATGGAATTCAAC
TCAAGCGCGCCCCTCAATAGCCAGGATTTAAGTTCTCTGCCTCCTGGCCAAATGAAAGCA
GAACCTTGA

Peptide Sequence

PEP ID

XP_016476167.1
PEP Infomation

PREDICTED: transcription factor bHLH49-like [Nicotiana tabacum]
Sequence

MDMSSKNDTEQLKVNEDAGNFQLPNMSLEWQLSDTNLTNASIGMIPKSDPTVDSFYPTIW
DRPTNSPNLSFYGNNVQINPSTTNPHGIAEIGSGRARGGVDRTVGMSWNPPNAMLKGGVF
VPPNIGMLPQSLAQLPADSGFIERAARFSCFSGGNFSDMMNPFSIPESVKPCYRGLAPTC
RSEDVFASNGLNSPSAINPQKQHMRNAVESSKDVALHREHETNKESPLKNEKKNENFGKS
QGEGKEAVGLSGNESDEAECSGRQEEMEGAREESSSKGLGSKKRKRNDQDAQPDQMKGAQ
QPPAEHAQDQTEIQGGPNLNSTASKPGEKNSKERSQASDPPKEEYIHIRARRGQATNSHS
LAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
QLDFNLDGLLAKDILQSQAGPSSSLVFPPDNMTMPYTSLHALQSGLLQSGFPGVGNCTDS
FRRSINSHYASMSGGYKDTSSQVPNIWDDQLHNVVEMEFNSSAPLNSQDLSSLPPGQMKA
EP

Transcript Sequence

Gene sequence data has not been registered.